CDS

Accession Number TCMCG006C28590
gbkey CDS
Protein Id XP_022548050.1
Location complement(join(2927610..2928304,2928415..2928670,2929054..2929155))
Gene LOC111200883
GeneID 111200883
Organism Brassica napus

Protein

Length 350aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022692329.1
Definition probable pectinesterase 56 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category G
Description Acts in the modification of cell walls via demethylesterification of cell wall pectin
KEGG_TC -
KEGG_Module M00081        [VIEW IN KEGG]
KEGG_Reaction R02362        [VIEW IN KEGG]
KEGG_rclass RC00460        [VIEW IN KEGG]
RC00461        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01051        [VIEW IN KEGG]
EC 3.1.1.11        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030599        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046910        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0052689        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATACATGGAAATTTCTTATGTTTCTCTTCTCTTATGGTTTCCATTCTCTTCTGGTTTCTCTGCTCTTCCGTCACCCAAGTTCGTATGACCGATCCCGAGGCGCTGAAGGTTAGAGCTGACGTCGTAGTAGCAAAGGATGGGACGGGACAGTTCACGACCGTGACGGAGGCTGTCGCATCGGCTCCGGAAAACATCAAGAAACGATACGTCATATATGTGAAGAAAGGAGTATATGAAGAGATTGTCAATATCGGGAAGAGGAAAGATAATATTACCATCGTAGGTGATGGCAGAGACTTAACAATTCTCACCGGCAGTCTCAGCGGTAACCATACCAGCCATACGGCAACTCTCGGTGTTGACGGAAATGGATTTACGGCACAGGATATCGGCATACAGAACACAGCCGGAGCGGAGAAGGGACAGGCCGTAGCCCTCCGCATAAGCGGGGATAGGTCCGTCGTGTACCGGTGCCGAGTTGAAGCATTTCAAGACACTCTCTATGCTCACTCGGGTAGACAATTTTACCGAGAATGCTATATAACTGGCACCGTAGATTTTATCTGCGGAGAAGCAGCAGCGGTCTTCCAACAATGCCAGATTGAAGCTAGAAAGCCGATGAAAGGACAGAGCAACATGATTACTGCCCAATCACGCAGTTACAAGACCCAGAACTCCGGGTTTACTATCTACAAATGTAACATCACGGCGACTCCAGATCTCACTCCAGTCAAAGGCACGGTAAAAACCTTTCTAGGACGTCCATGGGGTCCTTACTCAACCGTGGTGGTTATGAAGTCTTTTATAGACGACCTCATTGATCCAGCGGGTTGGGCACCGTGGGACATTAAAGATAAAGGGCGTTTGTCAACATTGTTCTATGGAGAATTTCAAAACTACGGTCCGGGGGCGAATACAACCAATAGAGTCAAATGGAAGGGATATAAATCAATAAAGGATCCGAAAGAAGCTGCAACATTCACACTTAAAAACCTTATAGGAGTGTCGTGGCTTAGATTTAGAGACGTTCCGTACGAGGACGGACTCTAA
Protein:  
MIHGNFLCFSSLMVSILFWFLCSSVTQVRMTDPEALKVRADVVVAKDGTGQFTTVTEAVASAPENIKKRYVIYVKKGVYEEIVNIGKRKDNITIVGDGRDLTILTGSLSGNHTSHTATLGVDGNGFTAQDIGIQNTAGAEKGQAVALRISGDRSVVYRCRVEAFQDTLYAHSGRQFYRECYITGTVDFICGEAAAVFQQCQIEARKPMKGQSNMITAQSRSYKTQNSGFTIYKCNITATPDLTPVKGTVKTFLGRPWGPYSTVVVMKSFIDDLIDPAGWAPWDIKDKGRLSTLFYGEFQNYGPGANTTNRVKWKGYKSIKDPKEAATFTLKNLIGVSWLRFRDVPYEDGL